Botswana Laboratory HIE Workflow Implementation Guide
0.2.0 - ci-build

Botswana Laboratory HIE Workflow Implementation Guide - Local Development build (v0.2.0). See the Directory of published versions

: PIMS Lab Test Code System - JSON Representation

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{
  "resourceType" : "CodeSystem",
  "id" : "bw-pims-lab-test-cs",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system http://b-techbw.github.io/bw-lab-ig/CodeSystem/bw-pims-lab-test-cs defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">CD4<a name=\"bw-pims-lab-test-cs-CD4\"> </a></td><td>CD4 Count</td><td>tblkLabTest#1 - CD4 count</td></tr><tr><td style=\"white-space:nowrap\">CD4%<a name=\"bw-pims-lab-test-cs-CD4.37\"> </a></td><td>CD4 Percentage</td><td>tblkLabTest#2 - CD4 Percent</td></tr><tr><td style=\"white-space:nowrap\">VL<a name=\"bw-pims-lab-test-cs-VL\"> </a></td><td>Viral Load</td><td>tblkLabTest#3 - Viral Load (HIV?)</td></tr><tr><td style=\"white-space:nowrap\">PCV<a name=\"bw-pims-lab-test-cs-PCV\"> </a></td><td>Packed Cell Volume (PCV)</td><td>tblkLabTest#4 - Packed Cell Volume</td></tr><tr><td style=\"white-space:nowrap\">WBC<a name=\"bw-pims-lab-test-cs-WBC\"> </a></td><td>White Blood Cells(WBC)</td><td>tblkLabTest#5 - White Blood Cells</td></tr><tr><td style=\"white-space:nowrap\">NP%<a name=\"bw-pims-lab-test-cs-NP.37\"> </a></td><td>Neutrophils %</td><td>tblkLabTest#7 - Neutrophils %</td></tr><tr><td style=\"white-space:nowrap\">AST<a name=\"bw-pims-lab-test-cs-AST\"> </a></td><td>Aspartate Aminotrasferase</td><td>tblkLabTest#9 - Aspartate aminotrasferase</td></tr><tr><td style=\"white-space:nowrap\">GGT<a name=\"bw-pims-lab-test-cs-GGT\"> </a></td><td>Gamma Glutamyl Transferase</td><td>tblkLabTest#10 - Gamma glutamyl transferase</td></tr><tr><td style=\"white-space:nowrap\">ALPL<a name=\"bw-pims-lab-test-cs-ALPL\"> </a></td><td>Alkaline Phosphatase</td><td>tblkLabTest#11 - Alkaline Phosphatase</td></tr><tr><td style=\"white-space:nowrap\">LIP<a name=\"bw-pims-lab-test-cs-LIP\"> </a></td><td>Lipase</td><td>tblkLabTest#12 - Lipase</td></tr><tr><td style=\"white-space:nowrap\">TGS<a name=\"bw-pims-lab-test-cs-TGS\"> </a></td><td>TGS</td><td>tblkLabTest#13 - TGS</td></tr><tr><td style=\"white-space:nowrap\">Urea<a name=\"bw-pims-lab-test-cs-Urea\"> </a></td><td>Urea</td><td>tblkLabTest#14 - Urea</td></tr><tr><td style=\"white-space:nowrap\">Na<a name=\"bw-pims-lab-test-cs-Na\"> </a></td><td>Sodium</td><td>tblkLabTest#15 - Sodium</td></tr><tr><td style=\"white-space:nowrap\">K<a name=\"bw-pims-lab-test-cs-K\"> </a></td><td>Potassium</td><td>tblkLabTest#16 - Potassium</td></tr><tr><td style=\"white-space:nowrap\">PCR<a name=\"bw-pims-lab-test-cs-PCR\"> </a></td><td>DNA PCR</td><td>tblkLabTest#17 - DNA PCR</td></tr><tr><td style=\"white-space:nowrap\">Ag<a name=\"bw-pims-lab-test-cs-Ag\"> </a></td><td>Ag</td><td>tblkLabTest#18 - DNA PCR</td></tr><tr><td style=\"white-space:nowrap\">CST<a name=\"bw-pims-lab-test-cs-CST\"> </a></td><td>Culture Sensitive Test</td><td>tblkLabTest#19 - Culture Sensitive Test</td></tr><tr><td style=\"white-space:nowrap\">MCV<a name=\"bw-pims-lab-test-cs-MCV\"> </a></td><td>Mean Cell Volume</td><td>tblkLabTest#20 - Mean cell volume</td></tr><tr><td style=\"white-space:nowrap\">Rapid<a name=\"bw-pims-lab-test-cs-Rapid\"> </a></td><td>Rapid</td><td>tblkLabTest#21 - Rapid</td></tr><tr><td style=\"white-space:nowrap\">ELISA<a name=\"bw-pims-lab-test-cs-ELISA\"> </a></td><td>ELISA</td><td>tblkLabTest#22 - ELISA</td></tr><tr><td style=\"white-space:nowrap\">UP<a name=\"bw-pims-lab-test-cs-UP\"> </a></td><td>Urine Pregnancy</td><td>tblkLabTest#23 - Urine pregnancy test</td></tr><tr><td style=\"white-space:nowrap\">CXRAY<a name=\"bw-pims-lab-test-cs-CXRAY\"> </a></td><td>Chest X-Ray</td><td>tblkLabTest#25 - Chest x-ray</td></tr><tr><td style=\"white-space:nowrap\">PT<a name=\"bw-pims-lab-test-cs-PT\"> </a></td><td>Pleural Tap</td><td>tblkLabTest#26 - Pleural tap</td></tr><tr><td style=\"white-space:nowrap\">CSF<a name=\"bw-pims-lab-test-cs-CSF\"> </a></td><td>CSF</td><td>tblkLabTest#27 - CSF</td></tr><tr><td style=\"white-space:nowrap\">LNB<a name=\"bw-pims-lab-test-cs-LNB\"> </a></td><td>Lymph Node Biopsy</td><td>tblkLabTest#28 - Lymph node biopsy</td></tr><tr><td style=\"white-space:nowrap\">SM<a name=\"bw-pims-lab-test-cs-SM\"> </a></td><td>Sputum Microscopy</td><td>tblkLabTest#130 - Sputum microscopy</td></tr></table></div>"
  },
  "url" : "http://b-techbw.github.io/bw-lab-ig/CodeSystem/bw-pims-lab-test-cs",
  "version" : "0.2.0",
  "name" : "BwPimsLabTestCS",
  "title" : "PIMS Lab Test Code System",
  "status" : "draft",
  "experimental" : true,
  "date" : "2022-02-05T01:33:00+00:00",
  "publisher" : "B-TECHBW",
  "contact" : [
    {
      "name" : "B-TECHBW",
      "telecom" : [
        {
          "system" : "url",
          "value" : "www.github.com/b-techbw"
        },
        {
          "system" : "email",
          "value" : "pmanko@uw.edu"
        }
      ]
    }
  ],
  "description" : "PIMS Lab Test Code System",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "072"
        }
      ]
    },
    {
      "coding" : [
        {
          "system" : "urn:iso:std:iso:3166",
          "code" : "BW"
        }
      ]
    }
  ],
  "content" : "complete",
  "count" : 26,
  "concept" : [
    {
      "code" : "CD4",
      "display" : "CD4 Count",
      "definition" : "tblkLabTest#1 - CD4 count"
    },
    {
      "code" : "CD4%",
      "display" : "CD4 Percentage",
      "definition" : "tblkLabTest#2 - CD4 Percent"
    },
    {
      "code" : "VL",
      "display" : "Viral Load",
      "definition" : "tblkLabTest#3 - Viral Load (HIV?)"
    },
    {
      "code" : "PCV",
      "display" : "Packed Cell Volume (PCV)",
      "definition" : "tblkLabTest#4 - Packed Cell Volume"
    },
    {
      "code" : "WBC",
      "display" : "White Blood Cells(WBC)",
      "definition" : "tblkLabTest#5 - White Blood Cells"
    },
    {
      "code" : "NP%",
      "display" : "Neutrophils %",
      "definition" : "tblkLabTest#7 - Neutrophils %"
    },
    {
      "code" : "AST",
      "display" : "Aspartate Aminotrasferase",
      "definition" : "tblkLabTest#9 - Aspartate aminotrasferase"
    },
    {
      "code" : "GGT",
      "display" : "Gamma Glutamyl Transferase",
      "definition" : "tblkLabTest#10 - Gamma glutamyl transferase"
    },
    {
      "code" : "ALPL",
      "display" : "Alkaline Phosphatase",
      "definition" : "tblkLabTest#11 - Alkaline Phosphatase"
    },
    {
      "code" : "LIP",
      "display" : "Lipase",
      "definition" : "tblkLabTest#12 - Lipase"
    },
    {
      "code" : "TGS",
      "display" : "TGS",
      "definition" : "tblkLabTest#13 - TGS"
    },
    {
      "code" : "Urea",
      "display" : "Urea",
      "definition" : "tblkLabTest#14 - Urea"
    },
    {
      "code" : "Na",
      "display" : "Sodium",
      "definition" : "tblkLabTest#15 - Sodium"
    },
    {
      "code" : "K",
      "display" : "Potassium",
      "definition" : "tblkLabTest#16 - Potassium"
    },
    {
      "code" : "PCR",
      "display" : "DNA PCR",
      "definition" : "tblkLabTest#17 - DNA PCR"
    },
    {
      "code" : "Ag",
      "display" : "Ag",
      "definition" : "tblkLabTest#18 - DNA PCR"
    },
    {
      "code" : "CST",
      "display" : "Culture Sensitive Test",
      "definition" : "tblkLabTest#19 - Culture Sensitive Test"
    },
    {
      "code" : "MCV",
      "display" : "Mean Cell Volume",
      "definition" : "tblkLabTest#20 - Mean cell volume"
    },
    {
      "code" : "Rapid",
      "display" : "Rapid",
      "definition" : "tblkLabTest#21 - Rapid"
    },
    {
      "code" : "ELISA",
      "display" : "ELISA",
      "definition" : "tblkLabTest#22 - ELISA"
    },
    {
      "code" : "UP",
      "display" : "Urine Pregnancy",
      "definition" : "tblkLabTest#23 - Urine pregnancy test"
    },
    {
      "code" : "CXRAY",
      "display" : "Chest X-Ray",
      "definition" : "tblkLabTest#25 - Chest x-ray"
    },
    {
      "code" : "PT",
      "display" : "Pleural Tap",
      "definition" : "tblkLabTest#26 - Pleural tap"
    },
    {
      "code" : "CSF",
      "display" : "CSF",
      "definition" : "tblkLabTest#27 - CSF"
    },
    {
      "code" : "LNB",
      "display" : "Lymph Node Biopsy",
      "definition" : "tblkLabTest#28 - Lymph node biopsy"
    },
    {
      "code" : "SM",
      "display" : "Sputum Microscopy",
      "definition" : "tblkLabTest#130 - Sputum microscopy"
    }
  ]
}